C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic helix-loop-helix family, member a15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060747 Bhlha15-001 ENSMUSG00000052271 10090 + 5:144190286-144194441 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060747 0.085±0.07 0.418±0.07 0.202±0.03 0.042±0.02 0.294±0.07 2.769±0.89 0.045±0.02 0.079±0.02 0.355±0.20 0.673±0.05 0.033±0.01 0.660±0.28 6.407±4.38 0.065±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053C CIL_00053C_0002 CGP 5:144100436-144194441
CIL_0005L3 CIL_0005L3_0003 CGP 5:144190286-144223615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS regulation of transcription, DNA-templated
GO:0006851 IMP mitochondrial calcium ion transport
GO:0007030 IMP Golgi organization
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0007267 IMP cell-cell signaling
GO:0019722 IMP calcium-mediated signaling
GO:0042593 IMP glucose homeostasis
GO:0042803 IPI protein homodimerization activity
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0048312 IMP intracellular distribution of mitochondria
GO:0048469 IMP cell maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000609256 BHLHA15-003 protein_coding Homo_sapiens 0 374

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