C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 397
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060762 Zfp397-201 ENSMUSG00000024276 10090 + 18:23954688-23964671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060762
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060762 2.367±0.87 1.266±0.24 7.064±1.00 5.124±2.29 1.698±0.66 1.616±0.24 1.202±0.10 1.567±0.73 2.729±1.94 1.442±0.14 1.956±0.75 2.587±1.33 2.922±0.97 2.002±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064X CIL_00064X_0002 CGP 18:23752333-23964671
CIL_0005Q1 CIL_0005Q1_0002 CGP 18:23954688-23981555

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261333 ZNF397-005 protein_coding Homo_sapiens 0 654
ENST00000270001 ZFP14-001 protein_coding Homo_sapiens 6e-38 165
ENST00000273320 ZKSCAN7-001 protein_coding Homo_sapiens 0 215
ENST00000274599 ZNF300-201 protein_coding Homo_sapiens 0 213
ENST00000316433 ZNF540-002 protein_coding Homo_sapiens 4e-21 108
ENST00000316950 ZNF569-001 protein_coding Homo_sapiens 8.96831e-44 183
ENST00000324306 ZKSCAN1-001 protein_coding Homo_sapiens 4e-36 159
ENST00000324461 ZNF283-201 protein_coding Homo_sapiens 2e-17 95
ENST00000330501 ZNF397-001 protein_coding Homo_sapiens 0 1805
ENST00000340684 ZNF124-004 protein_coding Homo_sapiens 0.0001 55
ENST00000342651 ZNF12-003 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000343599 ZNF540-004 protein_coding Homo_sapiens 4e-21 108
ENST00000352998 ZNF383-001 protein_coding Homo_sapiens 0 209
ENST00000355632 ZNF397-004 protein_coding Homo_sapiens 0 610
ENST00000359467 ZNF33B-007 protein_coding Homo_sapiens 8e-31 141
ENST00000360357 ZNF461-002 protein_coding Homo_sapiens 2e-32 145
ENST00000391711 ZNF829-001 protein_coding Homo_sapiens 0 250
ENST00000392149 ZNF569-002 protein_coding Homo_sapiens 7.9874e-44 183
ENST00000392150 ZNF569-201 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000392170 ZNF566-001 protein_coding Homo_sapiens 0 202
ENST00000394226 ZNF300-001 protein_coding Homo_sapiens 0 213
ENST00000396893 ZNF461-003 nonsense_mediated_decay Homo_sapiens 3e-32 145
ENST00000404360 ZNF12-002 protein_coding Homo_sapiens 3.9937e-43 182
ENST00000405858 ZNF12-001 protein_coding Homo_sapiens 3.9937e-43 182
ENST00000407696 RP11-534P19.1-001 processed_pseudogene Homo_sapiens 0.000006 55
ENST00000418587 ZNF300-202 protein_coding Homo_sapiens 0 213
ENST00000420450 ZNF345-001 protein_coding Homo_sapiens 0 233
ENST00000424129 ZNF566-002 protein_coding Homo_sapiens 0 202
ENST00000426540 ZKSCAN7-004 protein_coding Homo_sapiens 0 215
ENST00000426572 ZKSCAN1-003 protein_coding Homo_sapiens 7e-37 159
ENST00000427179 ZNF300-002 protein_coding Homo_sapiens 0 213
ENST00000429591 ZNF713-002 protein_coding Homo_sapiens 4e-17 95
ENST00000434377 ZNF566-201 protein_coding Homo_sapiens 0 202
ENST00000436261 ZNF852-001 protein_coding Homo_sapiens 0 195
ENST00000446148 ZNF300-203 protein_coding Homo_sapiens 0 213
ENST00000493391 ZNF566-003 protein_coding Homo_sapiens 0 202
ENST00000520965 ZNF829-003 protein_coding Homo_sapiens 0 250
ENST00000529555 ZNF345-003 protein_coding Homo_sapiens 0 233
ENST00000535170 ZKSCAN1-201 protein_coding Homo_sapiens 3e-36 159
ENST00000540605 ZNF461-005 processed_transcript Homo_sapiens 2e-32 145
ENST00000543802 ZNF124-009 protein_coding Homo_sapiens 0.0001 55
ENST00000585800 ZNF397-006 protein_coding Homo_sapiens 0 608
ENST00000586068 ZNF383-002 retained_intron Homo_sapiens 0 209
ENST00000587567 ZNF566-010 protein_coding Homo_sapiens 9e-19 99
ENST00000588119 ZNF397-009 protein_coding Homo_sapiens 0 422
ENST00000588268 ZNF461-001 protein_coding Homo_sapiens 3e-32 145
ENST00000588797 ZNF283-002 protein_coding Homo_sapiens 3e-17 95
ENST00000589046 ZNF345-010 protein_coding Homo_sapiens 0 233
ENST00000589117 ZNF540-001 protein_coding Homo_sapiens 3e-21 108
ENST00000589285 ZNF540-010 retained_intron Homo_sapiens 4e-21 108
ENST00000589413 ZNF383-004 protein_coding Homo_sapiens 0 209
ENST00000589630 ZNF397-007 retained_intron Homo_sapiens 0 477
ENST00000590487 ZNF461-004 retained_intron Homo_sapiens 2e-32 145
ENST00000590503 ZNF383-003 protein_coding Homo_sapiens 0 209
ENST00000591206 ZNF397-002 protein_coding Homo_sapiens 0 608
ENST00000591344 ZNF850-001 protein_coding Homo_sapiens 1e-35 158
ENST00000592264 ZNF397-008 protein_coding Homo_sapiens 0 612
ENST00000592533 ZNF540-009 protein_coding Homo_sapiens 4e-21 108
ENST00000601719 ZNF397-012 protein_coding Homo_sapiens 0 477
ENST00000611922 ZNF829-201 protein_coding Homo_sapiens 0 243
ENST00000612719 ZNF345-201 protein_coding Homo_sapiens 0 233
ENST00000613419 ZNF33B-201 protein_coding Homo_sapiens 8e-31 141
ENST00000614069 ZNF345-202 protein_coding Homo_sapiens 0 233
ENST00000614133 ZNF461-201 protein_coding Homo_sapiens 2e-32 145
ENST00000614887 ZNF850-201 protein_coding Homo_sapiens 1e-35 158
ENST00000616809 ZNF852-201 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000618437 ZNF461-202 protein_coding Homo_sapiens 2e-28 130
ENST00000618787 ZNF283-001 protein_coding Homo_sapiens 6e-17 95
ENST00000620510 ZKSCAN1-202 protein_coding Homo_sapiens 3e-36 159

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