C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin associated protein 5-4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061403 Krtap5-4-201 ENSMUSG00000045236 10090 + 7:142303502-142304503 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000061403
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000061403 0.029±0.00 0.073±0.03 0.040±0.01 0.023±0.00 0.032±0.01 0.016±0.01 0.032±0.00 0.076±0.01 0.153±0.02 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382160 KRTAP5-6-001 protein_coding Homo_sapiens 2e-28 130
ENST00000398531 KRTAP5-10-001 protein_coding Homo_sapiens 1e-18 99
ENST00000398534 KRTAP5-8-001 protein_coding Homo_sapiens 0 274
ENST00000398536 KRTAP5-7-001 protein_coding Homo_sapiens 2e-30 137
ENST00000399676 KRTAP5-5-001 protein_coding Homo_sapiens 0 230
ENST00000399685 KRTAP5-3-001 protein_coding Homo_sapiens 0 412
ENST00000502328 KRTAP5-14P-001 processed_pseudogene Homo_sapiens 1e-18 95
ENST00000511464 AP000867.14-001 processed_pseudogene Homo_sapiens 1e-31 139
ENST00000528743 KRTAP5-9-001 protein_coding Homo_sapiens 4.99997e-41 172
ENST00000610555 KRTAP5-8-201 protein_coding Homo_sapiens 0 407
ENST00000611731 KRTAP5-6-201 protein_coding Homo_sapiens 2e-28 130
ENST00000613035 AC130310.2-201 protein_coding Homo_sapiens 0 237
ENST00000615268 AC130310.3-202 protein_coding Homo_sapiens 0 268
ENST00000616336 AC130310.3-201 protein_coding Homo_sapiens 1e-39 167
ENST00000617152 KRTAP5-11-202 protein_coding Homo_sapiens 0 207
ENST00000618541 KRTAP5-5-201 protein_coding Homo_sapiens 0 230
ENST00000619191 KRTAP5-10-202 protein_coding Homo_sapiens 4e-21 106
ENST00000620564 KRTAP5-3-201 protein_coding Homo_sapiens 0 412

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