C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061427 Adamts3-201 ENSMUSG00000043635 10090 - 5:89673841-89883334 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061427 1.101±0.70 1.011±0.10 0.546±0.12 1.648±0.56 0.451±0.28 0.509±0.11 0.476±0.28 0.103±0.00 0.224±0.16 0.309±0.07 0.124±0.05 0.660±0.31 0.353±0.29 0.102±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DB CIL_0000DB_0002 CGP 5:89527429-89883334
CIL_0000DC CIL_0000DC_0002 CGP 5:89673841-90224001

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IDA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0016485 IDA protein processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286657 ADAMTS3-001 protein_coding Homo_sapiens 0 4023
ENST00000505193 ADAMTS3-004 processed_transcript Homo_sapiens 0 470
ENST00000511274 ADAMTS3-005 processed_transcript Homo_sapiens 0 850
ENST00000622135 ADAMTS3-201 protein_coding Homo_sapiens 0 4017

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