C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol glycan anchor biosynthesis, class V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062118 Pigv-001 ENSMUSG00000043257 10090 - 4:133660387-133672647 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062118
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062118 2.848±0.89 6.018±0.21 4.242±0.65 1.774±0.78 3.407±1.05 9.173±1.06 3.213±0.30 5.078±0.88 2.242±0.48 4.660±1.59 1.919±0.19 5.054±1.95 1.986±0.94 2.093±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0002 VISTA 4:133429051-134030305

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000030 IEA mannosyltransferase activity
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006506 IEA GPI anchor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000078527 PIGV-001 protein_coding Homo_sapiens 0 1452
ENST00000374145 PIGV-002 protein_coding Homo_sapiens 0 1319
ENST00000431541 PIGV-005 protein_coding Homo_sapiens 9e-37 158
ENST00000472757 PIGV-004 nonsense_mediated_decay Homo_sapiens 0 606

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