C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000062674 Rps15-002 ENSMUSG00000063457 10090 + 10:80292645-80294087 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000062674
Transcript ID Testis
ENSMUST00000062674 6.446±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZD CIL_0005ZD_0003 CGP 10:80261486-80294114
CIL_0000ZF CIL_0000ZF_0002 CGP 10:80292453-80318263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0006412 IEA translation
GO:0015935 IEA small ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104364 rps15-001 protein_coding Danio_rerio 0 398
ENST00000233609 RPS15-006 protein_coding Homo_sapiens 0 569
ENST00000412567 RP11-389O22.5-001 processed_pseudogene Homo_sapiens 0 444
ENST00000422958 RP5-827C21.1-001 processed_pseudogene Homo_sapiens 0 512
ENST00000433675 AC007969.5-001 processed_pseudogene Homo_sapiens 0 523
ENST00000449885 RPS15P5-001 processed_pseudogene Homo_sapiens 0 486
ENST00000476363 RP11-25H11.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000493323 RP11-264F23.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000522454 CTC-340A15.1-001 processed_pseudogene Homo_sapiens 0 379
ENST00000585665 RPS15-010 protein_coding Homo_sapiens 0 536
ENST00000586096 RPS15-011 protein_coding Homo_sapiens 0 411
ENST00000586686 RPS15-009 protein_coding Homo_sapiens 0 453
ENST00000589656 RPS15-004 protein_coding Homo_sapiens 0 505
ENST00000591032 RPS15-008 protein_coding Homo_sapiens 0 453
ENST00000591804 RPS15-013 protein_coding Homo_sapiens 0 453
ENST00000592588 RPS15-001 protein_coding Homo_sapiens 0 571
ENST00000592623 RPS15-012 protein_coding Homo_sapiens 0 580
ENST00000592700 RPS15-003 retained_intron Homo_sapiens 0 453
ENST00000593052 RPS15-002 protein_coding Homo_sapiens 0 571

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