C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemoglobin Z, beta-like embryonic chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000063957 Hbb-bh1-001 ENSMUSG00000052217 10090 - 7:103841636-103843164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainPlacentaENSMUST00000063957
Transcript ID Bladder Brain Placenta
ENSMUST00000063957 0.071±0.01 1.912±0.12 737.380±841.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0002 VISTA 7:103558636-104159881
CIL_0003R8 CIL_0003R8_0008 CGP 7:103839145-103843164
CIL_0003R8 CIL_0003R8_0005 CGP 7:103841636-103853240

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005833 IEA hemoglobin complex
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0031721 IEA hemoglobin alpha binding
GO:0051291 IEA protein heterooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292896 HBE1-201 protein_coding Homo_sapiens 0 339
ENST00000330597 HBG1-001 protein_coding Homo_sapiens 0 326
ENST00000336906 HBG2-201 protein_coding Homo_sapiens 0 337
ENST00000380237 HBE1-001 protein_coding Homo_sapiens 0 339
ENST00000380252 HBG2-004 protein_coding Homo_sapiens 0 272
ENST00000380259 HBG2-001 protein_coding Homo_sapiens 0 337
ENST00000444587 HBG2-003 processed_transcript Homo_sapiens 0 202
ENST00000620888 HBG2-202 protein_coding Homo_sapiens 0 331

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