C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: target of myb1-like 2 (chicken)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064019 Tom1l2-005 ENSMUSG00000000538 10090 - 11:60240570-60352905 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0002 VISTA 11:59693037-60296757
CIL_00003N CIL_00003N_0003 CGP 11:60199089-60352905
CIL_00058R CIL_00058R_0003 CGP 11:60226714-60394341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006886 IEA intracellular protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318094 TOM1L2-010 protein_coding Homo_sapiens 0 911
ENST00000379504 TOM1L2-001 protein_coding Homo_sapiens 0 1495
ENST00000382034 TOM1-201 protein_coding Homo_sapiens 0 244
ENST00000395736 TOM1-013 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000395739 TOM1L2-004 protein_coding Homo_sapiens 0 911
ENST00000404284 TOM1-003 nonsense_mediated_decay Homo_sapiens 5e-30 137
ENST00000411850 TOM1-202 protein_coding Homo_sapiens 0 252
ENST00000425375 TOM1-203 protein_coding Homo_sapiens 0 209
ENST00000439512 TOM1-011 nonsense_mediated_decay Homo_sapiens 4e-36 156
ENST00000443206 TOM1-012 protein_coding Homo_sapiens 0 231
ENST00000447733 TOM1-204 protein_coding Homo_sapiens 0 230
ENST00000449058 TOM1-001 protein_coding Homo_sapiens 0 252
ENST00000449508 TOM1-009 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000456128 TOM1-008 protein_coding Homo_sapiens 0 202
ENST00000465529 TOM1-005 retained_intron Homo_sapiens 3e-31 139
ENST00000478943 TOM1L2-003 protein_coding Homo_sapiens 0 588
ENST00000487670 TOM1-007 retained_intron Homo_sapiens 4e-36 156
ENST00000535933 TOM1L2-007 protein_coding Homo_sapiens 0 739
ENST00000537091 TOM1L2-011 retained_intron Homo_sapiens 0 651
ENST00000540946 TOM1L2-009 protein_coding Homo_sapiens 0 743
ENST00000542206 TOM1L2-008 protein_coding Homo_sapiens 0 739
ENST00000577517 TOM1L2-013 processed_transcript Homo_sapiens 0 359
ENST00000579586 TOM1L2-012 protein_coding Homo_sapiens 0 409
ENST00000581396 TOM1L2-002 protein_coding Homo_sapiens 0 1059
ENST00000608674 TOM1-017 protein_coding Homo_sapiens 0 206
ENST00000608749 TOM1-016 protein_coding Homo_sapiens 0 228

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