C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: inner membrane protein, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000064062 Immt-005 ENSMUSG00000052337 10090 + 6:71831331-71875244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000064062
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000064062 16.578±3.73 9.602±0.00 12.510±0.85 13.810±1.17 10.046±1.71 11.973±4.26 23.616±2.62 12.876±5.49 7.538±0.55 15.902±5.59 24.760±5.02 31.854±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QA CIL_0004QA_0002 CGP 6:71831331-71908762

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0009409 IEA response to cold
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0044822 IEA poly(A) RNA binding
GO:0051560 IMP mitochondrial calcium ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254636 IMMT-005 protein_coding Homo_sapiens 0 2438
ENST00000409051 IMMT-003 protein_coding Homo_sapiens 0 2399
ENST00000409258 IMMT-008 nonsense_mediated_decay Homo_sapiens 0 682
ENST00000410111 IMMT-001 protein_coding Homo_sapiens 0 3037
ENST00000419070 IMMT-007 protein_coding Homo_sapiens 0 2281
ENST00000435590 IMMTP1-001 processed_pseudogene Homo_sapiens 0 1640
ENST00000442664 IMMT-014 protein_coding Homo_sapiens 0 2987
ENST00000449247 IMMT-002 protein_coding Homo_sapiens 0 2453
ENST00000460081 IMMT-012 retained_intron Homo_sapiens 7.00005e-41 171
ENST00000474969 IMMT-009 retained_intron Homo_sapiens 0 1339
ENST00000486633 IMMT-013 retained_intron Homo_sapiens 0 545
ENST00000490238 IMMT-010 processed_transcript Homo_sapiens 0 556
ENST00000620815 IMMT-201 protein_coding Homo_sapiens 0 867

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