C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6457
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000066378 Gm6457-201 ENSMUSG00000053740 10090 + 18:14570101-14570915 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000066378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000066378 0.956±0.67 0.330±0.00 0.849±0.01 2.244±2.01 0.812±0.46 0.298±0.13 0.448±0.51 0.448±0.36 0.678±0.63 1.387±0.10 0.090±0.02 0.840±0.29 0.124±0.08 0.308±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LU CIL_0007LU_0002 UCNEbase 18:13186157-15176263
CIL_0008G6 CIL_0008G6_0002 VISTA 18:14005020-14606278
CIL_0008CS CIL_0008CS_0002 VISTA 18:14158160-14760150

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260443 RSL24D1-001 protein_coding Homo_sapiens 0 588
ENST00000400938 RSL24D1P4-001 processed_pseudogene Homo_sapiens 0 383
ENST00000404972 RSL24D1P1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000426934 RSL24D1P6-001 processed_pseudogene Homo_sapiens 0 348
ENST00000434442 RSL24D1P8-001 processed_pseudogene Homo_sapiens 0 449
ENST00000445584 RSL24D1P2-001 processed_pseudogene Homo_sapiens 0 342
ENST00000449255 RSL24D1P3-001 processed_pseudogene Homo_sapiens 0 412
ENST00000509365 RP11-510I6.3-001 processed_pseudogene Homo_sapiens 0 392
ENST00000553036 RSL24D1P5-001 processed_pseudogene Homo_sapiens 0 403
ENST00000562993 RSL24D1-002 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000564344 RSL24D1-006 processed_transcript Homo_sapiens 0 224
ENST00000569386 RSL24D1-004 protein_coding Homo_sapiens 0 196
ENST00000591045 RSL24D1P11-001 processed_pseudogene Homo_sapiens 0 442
ENST00000605454 AC015849.14-001 processed_pseudogene Homo_sapiens 0 466

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