C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly (ADP-ribose) polymerase family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067218 Parp3-001 ENSMUSG00000023249 10090 - 9:106470322-106476949 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067218
Transcript ID Adipose Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067218 3.738±0.00 6.371±1.28 5.853±1.17 2.851±0.19 2.237±0.63 1.615±0.06 3.591±0.27 5.715±1.10 2.780±0.00 1.494±0.09 1.271±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000723 IEA telomere maintenance
GO:0006302 IGI double-strand break repair
GO:0035861 IDA site of double-strand break
GO:0051106 IEA positive regulation of DNA ligation
GO:0060236 IEA regulation of mitotic spindle organization
GO:1990166 IEA protein localization to site of double-strand break

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265641 CPT1A-006 protein_coding Homo_sapiens 0.000000003 69
ENST00000315872 ROCK2-001 protein_coding Homo_sapiens 0.000000002 71
ENST00000322734 ZNF660-001 protein_coding Homo_sapiens 0.000000001 71
ENST00000332272 CHST6-003 protein_coding Homo_sapiens 0.000003 60
ENST00000357618 HFE-001 protein_coding Homo_sapiens 0.0000000003 73
ENST00000360954 HS3ST3B1-001 protein_coding Homo_sapiens 0.000000001 71
ENST00000366398 RP5-886K2.1-001 processed_pseudogene Homo_sapiens 0.00000003 64
ENST00000375147 NCBP1-001 protein_coding Homo_sapiens 0.0000002 64
ENST00000375218 UBR4-005 protein_coding Homo_sapiens 0.00000003 66
ENST00000398755 PARP3-001 protein_coding Homo_sapiens 0 1336
ENST00000417220 PARP3-002 protein_coding Homo_sapiens 0 1336
ENST00000427635 HERC4-010 nonsense_mediated_decay Homo_sapiens 0.000000001 71
ENST00000431474 PARP3-201 protein_coding Homo_sapiens 0 1341
ENST00000471971 PARP3-003 nonsense_mediated_decay Homo_sapiens 0 1341
ENST00000475782 PARP3-006 retained_intron Homo_sapiens 0 547
ENST00000476499 ARHGAP21-002 retained_intron Homo_sapiens 0.0000000003 71
ENST00000482294 CBX7-002 retained_intron Homo_sapiens 0.00000003 66
ENST00000486510 PARP3-008 processed_transcript Homo_sapiens 0 292
ENST00000497969 SUZ12P1-002 processed_transcript Homo_sapiens 0.0000000000003 81
ENST00000498510 PARP3-005 protein_coding Homo_sapiens 0 763
ENST00000513517 NUDT6-003 retained_intron Homo_sapiens 0.00000004 66
ENST00000575711 RPAIN-016 retained_intron Homo_sapiens 0.00000008 62
ENST00000595936 C10orf11-015 processed_transcript Homo_sapiens 0.00000004 62
ENST00000598067 FCHO1-014 protein_coding Homo_sapiens 0.0000000003 69
ENST00000598708 C10orf11-007 processed_transcript Homo_sapiens 0.00000004 62
ENST00000616279 ROCK2-201 protein_coding Homo_sapiens 0.000000001 71

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