C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cDNA sequence BC055111
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067387 BC055111-002 ENSMUSG00000054362 10090 - 4:106590909-106617241 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungOvaryPlacentaENSMUST00000067387
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000067387 0.007±0.00 0.027±0.02 0.023±0.00 0.003±0.00 0.005±0.00 0.011±0.01 0.019±0.00 0.018±0.00 0.195±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358193 C1orf177-001 protein_coding Homo_sapiens 9e-31 139
ENST00000371273 C1orf177-002 protein_coding Homo_sapiens 0 881

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