C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin-like 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000067784 Cdh24-201 ENSMUSG00000059674 10090 - 14:54631992-54641364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067784
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067784 1.349±1.30 0.870±0.35 1.618±0.00 1.809±0.48 0.583±0.15 0.109±0.07 0.531±0.00 0.388±0.45 0.875±0.07 0.061±0.03 3.190±1.82 3.179±0.27 1.117±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MR CIL_0006MR_0002 CGP 14:54625310-54641364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0008013 IEA beta-catenin binding
GO:0016021 IEA integral component of membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0045294 IEA alpha-catenin binding
GO:0070097 IEA delta-catenin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000002279 cdh11-201 protein_coding Danio_rerio 0 228
ENSDART00000111261 protein_coding Danio_rerio 0 204
ENSDART00000138769 protein_coding Danio_rerio 0 204
ENSDART00000127332 cdh11-001 protein_coding Danio_rerio 0 202
ENSDART00000054552 CDH8-201 protein_coding Danio_rerio 8e-23 113
ENST00000267383 CDH24-006 protein_coding Homo_sapiens 0 1805
ENST00000274170 CDH18-201 protein_coding Homo_sapiens 0.00000000000006 84
ENST00000382275 CDH18-001 protein_coding Homo_sapiens 0.00000000000007 84
ENST00000397359 CDH24-201 protein_coding Homo_sapiens 0 1986
ENST00000485922 CDH24-005 processed_transcript Homo_sapiens 0 1258
ENST00000487137 CDH24-202 protein_coding Homo_sapiens 0 3238
ENST00000502796 CDH18-003 protein_coding Homo_sapiens 0.00000000000006 84
ENST00000506372 CDH18-004 protein_coding Homo_sapiens 0.00000000000006 84
ENST00000507958 CDH18-005 protein_coding Homo_sapiens 0.00000000000008 84
ENST00000508350 CDH18-010 processed_transcript Homo_sapiens 0.000000001 68
ENST00000511273 CDH18-002 protein_coding Homo_sapiens 0.00000000000005 84
ENST00000515257 CDH18-006 protein_coding Homo_sapiens 0.00000000000003 84
ENST00000554034 CDH24-007 protein_coding Homo_sapiens 0 3057
ENST00000610348 CDH24-203 protein_coding Homo_sapiens 0 861

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