C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: progestin and adipoQ receptor family member VIII
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068880 Paqr8-002 ENSMUSG00000025931 10090 + 1:20917840-20939055 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000068880
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000068880 0.357±0.11 6.698±0.00 2.009±0.20 5.547±3.81 0.316±0.03 0.226±0.02 0.151±0.04 0.083±0.03 0.069±0.03 2.751±0.40 0.886±0.54 4.024±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081C CIL_00081C_0002 VISTA 1:20619958-21222635
CIL_0002I8 CIL_0002I8_0003 CGP 1:20802968-20939650
CIL_0005N1 CIL_0005N1_0002 CGP 1:20890606-20990841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003707 IBA steroid hormone receptor activity
GO:0005496 IBA steroid binding
GO:0005886 IBA plasma membrane
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane
GO:0043401 IBA steroid hormone mediated signaling pathway
GO:0048477 IEA oogenesis
GO:0048545 IBA response to steroid hormone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360726 PAQR8-002 protein_coding Homo_sapiens 0 1208
ENST00000442253 PAQR8-001 protein_coding Homo_sapiens 0 1208
ENST00000512121 PAQR8-003 protein_coding Homo_sapiens 0 392

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