C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of glucose, autophagy associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069098 Soga1-001 ENSMUSG00000055485 10090 - 2:157015799-157079254 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069098
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069098 6.366±3.11 6.750±0.49 2.874±1.61 1.746±0.88 0.809±0.00 0.741±0.36 6.429±0.00 0.394±0.21 3.567±1.97 6.549±1.76 1.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XR CIL_0000XR_0002 CGP 2:156995265-157079254
CIL_0004XY CIL_0004XY_0002 CGP 2:157015799-157096482

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005615 IEA:IDA extracellular space
GO:0008286 IDA insulin receptor signaling pathway
GO:0010506 IEA:IDA regulation of autophagy
GO:0045721 IMP negative regulation of gluconeogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237536 SOGA1-005 protein_coding Homo_sapiens 0 5879
ENST00000279034 SOGA1-003 protein_coding Homo_sapiens 0 3531
ENST00000306329 MTCL1-015 protein_coding Homo_sapiens 0 206
ENST00000359865 MTCL1-001 protein_coding Homo_sapiens 1e-33 150
ENST00000400050 MTCL1-201 protein_coding Homo_sapiens 1e-33 150
ENST00000463491 SOGA1-004 retained_intron Homo_sapiens 0 405
ENST00000465671 SOGA1-001 nonsense_mediated_decay Homo_sapiens 0 4405
ENST00000517570 MTCL1-003 protein_coding Homo_sapiens 1e-33 150
ENST00000520495 MTCL1-004 nonsense_mediated_decay Homo_sapiens 3e-32 145

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