C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 181
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000069580 Rnf181-001 ENSMUSG00000055850 10090 - 6:72359714-72362432 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000069580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000069580 28.148±3.14 73.576±7.99 32.302±0.11 17.517±2.45 19.394±5.10 24.922±1.98 15.272±1.52 67.546±2.30 28.179±3.53 46.013±3.12 18.118±2.81 35.895±10.18 59.122±20.87 4.004±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WR CIL_0007WR_0002 VISTA 6:71915186-72518828
CIL_00084P CIL_00084P_0002 VISTA 6:71915200-72518764
CIL_0009AX CIL_0009AX_0002 VISTA 6:72353769-72955984
CIL_0005JP CIL_0005JP_0002 CGP 6:72355447-72362721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0051865 IEA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000493920 RP11-251G23.2-001 processed_pseudogene Homo_sapiens 0 346

Loading