C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000070508 Lrrc29-201 ENSMUSG00000041679 10090 - 8:105312341-105326276 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070508
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070508 2.586±0.20 2.509±1.40 2.027±0.52 0.583±0.09 2.785±0.49 2.672±0.87 0.276±0.01 2.649±0.44 4.925±3.23 2.912±0.40 0.235±0.09 1.281±0.78 1.325±0.01 31.495±15.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003M1 CIL_0003M1_0003 CGP 8:105305601-105326276
CIL_0005K1 CIL_0005K1_0002 CGP 8:105312341-105335219

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393992 LRRC29-001 protein_coding Homo_sapiens 0 433
ENST00000409037 LRRC29-005 protein_coding Homo_sapiens 0 433
ENST00000409509 LRRC29-002 protein_coding Homo_sapiens 0 460
ENST00000424285 LRRC29-007 protein_coding Homo_sapiens 0 235
ENST00000433915 LRRC29-008 protein_coding Homo_sapiens 0 512
ENST00000447579 LRRC29-009 protein_coding Homo_sapiens 2e-35 154
ENST00000462169 LRRC29-004 processed_transcript Homo_sapiens 0 713
ENST00000485549 LRRC29-006 processed_transcript Homo_sapiens 0 209

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