C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5619
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071172 RP23-58N8.4-001 ENSMUSG00000099980 10090 - 9:85781868-85782627 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000071172
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000071172 0.053±0.01 0.173±0.00 0.030±0.01 0.048±0.01 0.144±0.00 0.125±0.04 0.124±0.07 0.044±0.02 0.191±0.00 0.178±0.01 0.054±0.03 0.043±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GF CIL_0006GF_0002 CGP 9:85687360-85847040

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 4.00001e-40 169
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 905
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 632
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 592
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 737
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 595
ENST00000418052 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 743
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 453
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 713
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 496
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 553
ENST00000427056 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 760
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 782
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 564
ENST00000430506 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 754
ENST00000430732 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 743
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 662
ENST00000437448 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 743
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 608
ENST00000445592 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 754
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 407
ENST00000451600 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 743
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 771
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 656
ENST00000453429 RPL7AP7-001 processed_pseudogene Homo_sapiens 0 743
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 555
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 905
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 765
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 701
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 374
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 872
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 822
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 592
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 459
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 647
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 686
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 538
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 652
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 206
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 811
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 468
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 872

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