C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger with KRAB and SCAN domains 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071465 Zkscan6-002 ENSMUSG00000018347 10090 + 11:65807175-65829238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071465 1.976±0.65 1.795±0.63 2.994±0.69 3.677±0.63 1.874±0.60 3.016±0.42 0.707±0.27 1.532±0.26 1.806±0.67 1.618±0.46 0.916±0.26 3.470±1.73 2.810±1.05 4.422±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WK CIL_0008WK_0002 VISTA 11:65348906-65951643

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000223428 ZNF510-201 protein_coding Homo_sapiens 0.00009 55
ENST00000269973 ZNF45-001 protein_coding Homo_sapiens 0.000000009 68
ENST00000301399 ZNF577-001 protein_coding Homo_sapiens 0.0000003 62
ENST00000322748 ZNF18-002 protein_coding Homo_sapiens 0 1395
ENST00000337433 ZNF226-201 protein_coding Homo_sapiens 0.0002 53
ENST00000337815 ZNF664-009 protein_coding Homo_sapiens 0.0000000000004 82
ENST00000375231 ZNF510-001 protein_coding Homo_sapiens 0.0001 55
ENST00000392404 ZNF664-003 protein_coding Homo_sapiens 0.0000000000004 82
ENST00000420592 ZNF577-004 protein_coding Homo_sapiens 0.0000003 62
ENST00000443387 ZNF146-001 protein_coding Homo_sapiens 0.0000004 62
ENST00000451628 ZNF577-003 protein_coding Homo_sapiens 0.0000002 62
ENST00000454073 ZNF18-004 protein_coding Homo_sapiens 0 1376
ENST00000454662 ZNF226-001 protein_coding Homo_sapiens 0.0002 53
ENST00000456324 ZNF146-201 protein_coding Homo_sapiens 0.0000004 62
ENST00000458390 ZNF577-002 protein_coding Homo_sapiens 0.0000003 62
ENST00000538932 ZNF664-002 protein_coding Homo_sapiens 0.0000000000004 82
ENST00000539644 ZNF664-001 protein_coding Homo_sapiens 0.0000000000004 82
ENST00000577671 ZNF18-007 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000580306 ZNF18-001 protein_coding Homo_sapiens 0 1395
ENST00000580613 ZNF18-201 protein_coding Homo_sapiens 0 1395
ENST00000580903 ZNF18-005 protein_coding Homo_sapiens 0 300
ENST00000582607 ZNF18-006 protein_coding Homo_sapiens 0 442
ENST00000588883 ZNF226-002 protein_coding Homo_sapiens 0.0004 53
ENST00000589703 ZNF45-002 protein_coding Homo_sapiens 0.000000006 68
ENST00000590089 ZNF226-005 protein_coding Homo_sapiens 0.0002 53
ENST00000613197 ZNF229-001 protein_coding Homo_sapiens 0.00009 55
ENST00000614049 ZNF229-002 protein_coding Homo_sapiens 0.00008 55
ENST00000615985 ZNF45-201 protein_coding Homo_sapiens 0.000000007 68
ENST00000619033 ZNF664-201 protein_coding Homo_sapiens 0.0000000000004 82
ENST00000620012 ZNF229-003 nonsense_mediated_decay Homo_sapiens 0.0001 55

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