C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal-induced proliferation associated gene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071857 Sipa1-201 ENSMUSG00000056917 10090 - 19:5651185-5663707 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000071857
Transcript ID Bladder Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000071857 0.751±0.00 1.632±0.24 1.368±0.00 1.352±0.19 0.792±0.11 4.990±0.26 0.528±0.10 1.104±0.28 0.211±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0008022 IEA protein C-terminus binding
GO:0030133 IEA transport vesicle
GO:0042631 IEA cellular response to water deprivation
GO:0043234 IEA protein complex
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction
GO:0051726 IDA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394224 SIPA1-003 protein_coding Homo_sapiens 0 3323
ENST00000394227 SIPA1-201 protein_coding Homo_sapiens 0 3275
ENST00000527525 SIPA1-002 protein_coding Homo_sapiens 0 1899
ENST00000533361 SIPA1-004 protein_coding Homo_sapiens 0 436
ENST00000534313 SIPA1-001 protein_coding Homo_sapiens 0 3275
ENST00000534406 SIPA1-006 retained_intron Homo_sapiens 0 270

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