C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L21, pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074828 Rpl21-ps6-001 ENSMUSG00000059912 10090 - 17:55915403-55915870 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverLungOvaryPlacentaTestisENSMUST00000074828
Transcript ID Adipose Bladder Brain Liver Lung Ovary Placenta Testis
ENSMUST00000074828 0.343±0.00 0.213±0.04 0.068±0.03 0.103±0.07 0.199±0.00 0.423±0.29 0.116±0.04 0.111±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 254
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 490
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 490
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 490
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 490
ENST00000395517 RPL21P3-001 processed_pseudogene Homo_sapiens 0 398
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 484
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 0 396
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 457
ENST00000416102 AC017079.4-001 processed_pseudogene Homo_sapiens 0 307
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 327
ENST00000417077 RP11-339A7.1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 431
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 435
ENST00000432935 RP5-1068B5.1-001 processed_pseudogene Homo_sapiens 0.00000004 62
ENST00000433345 RPL21P110-001 processed_pseudogene Homo_sapiens 0 207
ENST00000433493 RP5-859M6.1-001 processed_pseudogene Homo_sapiens 0 309
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 324
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 268
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 451
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 300
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 429
ENST00000465083 RPL21P8-001 processed_pseudogene Homo_sapiens 0 252
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 322
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000472975 RP11-112N19.2-001 processed_pseudogene Homo_sapiens 0 399
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 433
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 0 254
ENST00000480465 RP11-492M23.2-001 processed_pseudogene Homo_sapiens 0 455
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 440
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 403
ENST00000484462 RPL21P119-001 processed_pseudogene Homo_sapiens 0 481
ENST00000485217 CTD-2182N23.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 466
ENST00000487382 CTD-2158P22.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 0 329
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 433
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 490
ENST00000496412 CTD-2290C23.2-001 processed_pseudogene Homo_sapiens 0 381
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 407
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 442

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