C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075637 Ptpn3-001 ENSMUSG00000038764 10090 - 4:57190841-57301837 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000075637
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000075637 0.687±0.19 2.647±0.00 0.206±0.00 1.154±0.00 3.774±1.43 1.602±0.58 1.618±0.33 1.040±0.58 0.957±0.45 1.075±0.55 0.710±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IY CIL_0001IY_0002 CGP 4:56991972-57301837
CIL_0001GE CIL_0001GE_0002 CGP 4:57190841-57712016

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001784 IEA phosphotyrosine binding
GO:0004725 ISS protein tyrosine phosphatase activity
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008092 IEA cytoskeletal protein binding
GO:0009898 IEA cytoplasmic side of plasma membrane
GO:0017080 IEA sodium channel regulator activity
GO:0019898 IEA extrinsic component of membrane
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045930 IEA negative regulation of mitotic cell cycle
GO:0051045 IEA negative regulation of membrane protein ectodomain proteolysis
GO:0051117 IEA ATPase binding
GO:0097421 IEA liver regeneration
GO:0098902 IEA regulation of membrane depolarization during action potential
GO:2000649 IEA regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262539 PTPN3-201 protein_coding Homo_sapiens 0 2706
ENST00000374541 PTPN3-001 protein_coding Homo_sapiens 0 3217
ENST00000412145 PTPN3-202 protein_coding Homo_sapiens 0 2809
ENST00000446349 PTPN3-203 protein_coding Homo_sapiens 0 1886
ENST00000497739 PTPN3-002 processed_transcript Homo_sapiens 0 370

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