C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: G protein-coupled bile acid receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077985 Gpbar1-001 ENSMUSG00000064272 10090 + 1:74278550-74279624 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000077985
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000077985 0.158±0.02 0.108±0.03 0.046±0.00 0.077±0.02 0.682±0.00 0.047±0.02 0.146±0.09 0.101±0.04 0.068±0.01 0.957±0.60 1.575±1.75 0.130±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005VL CIL_0005VL_0002 CGP 1:74236084-74279624
CIL_0005VK CIL_0005VK_0002 CGP 1:74278550-74284738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 ISO G-protein coupled receptor activity
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane
GO:0038181 IEA bile acid receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000479077 GPBAR1-001 protein_coding Homo_sapiens 0 922
ENST00000519574 GPBAR1-003 protein_coding Homo_sapiens 0 920
ENST00000521462 GPBAR1-004 protein_coding Homo_sapiens 0 924
ENST00000522678 GPBAR1-002 protein_coding Homo_sapiens 0 924

Loading