C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: beta-site APP cleaving enzyme 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078111 Bace1-002 ENSMUSG00000032086 10090 + 9:45838580-45862484 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastHeartKidneyMusclePlacentaENSMUST00000078111
Transcript ID Adrenal Brain Breast Heart Kidney Muscle Placenta
ENSMUST00000078111 16.275±1.59 9.646±0.00 12.835±0.00 7.238±1.18 8.079±0.43 5.477±1.97 9.209±4.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0006508 IDA proteolysis
GO:0016020 IDA membrane
GO:0030424 IDA axon
GO:0031410 IDA cytoplasmic vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313005 BACE1-001 protein_coding Homo_sapiens 0 1291
ENST00000392937 BACE1-006 protein_coding Homo_sapiens 0 1175
ENST00000428381 BACE1-002 protein_coding Homo_sapiens 0 802
ENST00000445823 BACE1-004 protein_coding Homo_sapiens 0 802
ENST00000504995 BACE1-008 protein_coding Homo_sapiens 0 782
ENST00000509916 BACE1-010 retained_intron Homo_sapiens 0 412
ENST00000510630 BACE1-007 protein_coding Homo_sapiens 0 841
ENST00000510915 BACE1-009 protein_coding Homo_sapiens 0 673
ENST00000513780 BACE1-003 protein_coding Homo_sapiens 0 802
ENST00000514464 BACE1-005 processed_transcript Homo_sapiens 0 484
ENST00000528053 BACE1-013 protein_coding Homo_sapiens 0 2471
ENST00000530824 BACE1-016 retained_intron Homo_sapiens 0 340

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