C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scinderin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078481 Scin-002 ENSMUSG00000002565 10090 - 12:40059769-40134183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000078481
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000078481 1.976±0.13 0.563±0.27 0.034±0.00 0.433±0.28 94.009±17.29 0.513±0.31 14.800±1.57 0.025±0.01 0.355±0.15 1.076±0.66 0.160±0.01 0.157±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055B CIL_00055B_0002 CGP 12:40005447-40134228

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0032330 ISS regulation of chondrocyte differentiation
GO:0051693 IEA actin filament capping

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297029 SCIN-001 protein_coding Homo_sapiens 0 1742
ENST00000341757 SCIN-002 nonsense_mediated_decay Homo_sapiens 0 1740
ENST00000473722 SCIN-004 processed_transcript Homo_sapiens 0 592
ENST00000519209 SCIN-008 protein_coding Homo_sapiens 0 1212

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