C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079247 H13-003 ENSMUSG00000019188 10090 + 2:152669534-152704128 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryENSMUST00000079247
Transcript ID Adrenal Ovary
ENSMUST00000079247 70.563±0.63 48.521±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A0 CIL_0001A0_0002 CGP 2:152626951-152708670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335574 HM13-009 protein_coding Homo_sapiens 0 830
ENST00000340852 HM13-011 protein_coding Homo_sapiens 0 830
ENST00000344042 HM13-014 protein_coding Homo_sapiens 0 1219
ENST00000398174 HM13-012 protein_coding Homo_sapiens 0 830
ENST00000460225 HM13-018 processed_transcript Homo_sapiens 0 327
ENST00000460389 HM13-002 processed_transcript Homo_sapiens 0 309
ENST00000464661 HM13-026 processed_transcript Homo_sapiens 0 202
ENST00000466766 HM13-015 processed_transcript Homo_sapiens 0 270
ENST00000468559 HM13-024 processed_transcript Homo_sapiens 0 313
ENST00000469097 HM13-006 processed_transcript Homo_sapiens 0 407
ENST00000469126 HM13-019 processed_transcript Homo_sapiens 0 1098
ENST00000472128 HM13-008 processed_transcript Homo_sapiens 0 516
ENST00000474466 HM13-023 processed_transcript Homo_sapiens 0 385
ENST00000483310 HM13-001 processed_transcript Homo_sapiens 0 407
ENST00000487964 HM13-021 processed_transcript Homo_sapiens 0 490
ENST00000492709 HM13-020 processed_transcript Homo_sapiens 0 518
ENST00000494153 HM13-004 processed_transcript Homo_sapiens 0 640
ENST00000496438 HM13-017 processed_transcript Homo_sapiens 0 584
ENST00000498035 HM13-013 protein_coding Homo_sapiens 0 584
ENST00000619859 HM13-027 protein_coding Homo_sapiens 0 189

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