C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metastasis suppressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080371 Mtss1-201 ENSMUSG00000022353 10090 - 15:58941244-59082026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080371
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080371 14.503±1.97 31.490±8.95 8.255±2.06 40.983±7.16 30.488±10.21 18.009±5.13 8.567±2.76 23.308±2.85 26.796±17.94 26.346±4.31 1.781±0.63 10.410±4.53 13.551±6.09 1.259±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000461 CIL_000461_0002 CGP 15:58933810-59082026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IGI in utero embryonic development
GO:0003779 IDA actin binding
GO:0003785 IEA actin monomer binding
GO:0005102 IEA receptor binding
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005912 IDA adherens junction
GO:0007015 IDA actin filament organization
GO:0007165 IEA signal transduction
GO:0008093 IEA cytoskeletal adaptor activity
GO:0010960 IMP magnesium ion homeostasis
GO:0015629 IEA actin cytoskeleton
GO:0017124 IEA SH3 domain binding
GO:0030041 IDA actin filament polymerization
GO:0030282 IMP bone mineralization
GO:0032233 IMP positive regulation of actin filament bundle assembly
GO:0034334 IMP adherens junction maintenance
GO:0042802 IEA identical protein binding
GO:0046847 IEA filopodium assembly
GO:0051015 IDA actin filament binding
GO:0072001 IMP renal system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325064 MTSS1-005 protein_coding Homo_sapiens 0 3249
ENST00000378017 MTSS1-002 protein_coding Homo_sapiens 0 3051
ENST00000431961 MTSS1-003 protein_coding Homo_sapiens 0 1282
ENST00000472084 MTSS1-009 retained_intron Homo_sapiens 0 403
ENST00000518547 MTSS1-001 protein_coding Homo_sapiens 0 4883
ENST00000519168 MTSS1-006 protein_coding Homo_sapiens 0 1757
ENST00000520094 MTSS1-017 processed_transcript Homo_sapiens 0 604
ENST00000520771 MTSS1-008 retained_intron Homo_sapiens 0 2686
ENST00000522118 MTSS1-013 protein_coding Homo_sapiens 0 996
ENST00000522162 MTSS1-010 protein_coding Homo_sapiens 0 593
ENST00000522532 NDUFB9-002 protein_coding Homo_sapiens 2e-30 137
ENST00000522722 MTSS1-016 processed_transcript Homo_sapiens 0 603
ENST00000523179 MTSS1-014 protein_coding Homo_sapiens 0 699
ENST00000523587 MTSS1-007 processed_transcript Homo_sapiens 0 1940
ENST00000524090 MTSS1-004 protein_coding Homo_sapiens 0 2327
ENST00000524243 MTSS1-011 processed_transcript Homo_sapiens 0 375
ENST00000529463 MTSS1-018 processed_transcript Homo_sapiens 0 311

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