C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 1a5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081380 Slco1a5-001 ENSMUSG00000063975 10090 - 6:142234227-142322981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLungMuscleOvaryTestisENSMUST00000081380
Transcript ID Brain Breast Heart Lung Muscle Ovary Testis
ENSMUST00000081380 0.076±0.01 0.119±0.03 0.056±0.00 0.055±0.01 0.014±0.00 0.681±0.48 0.187±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PZ CIL_0005PZ_0002 CGP 6:142234227-142322981

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 ISO integral component of plasma membrane
GO:0015125 ISO bile acid transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000307378 SLCO1A2-001 protein_coding Homo_sapiens 0 1328
ENST00000421294 SLCO1A2-011 protein_coding Homo_sapiens 0 350
ENST00000422327 SLCO1A2-012 protein_coding Homo_sapiens 0 460
ENST00000435179 SLCO1A2-007 protein_coding Homo_sapiens 0 307
ENST00000445053 SLCO1A2-005 protein_coding Homo_sapiens 0 215
ENST00000450590 SLCO1A2-010 protein_coding Homo_sapiens 0 318
ENST00000453443 SLCO1A2-009 protein_coding Homo_sapiens 0 449
ENST00000463718 SLCO1A2-003 retained_intron Homo_sapiens 0 1164
ENST00000480394 SLCO1A2-004 retained_intron Homo_sapiens 0 935

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