C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH-type containing 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081591 Zc3h15-001 ENSMUSG00000027091 10090 + 2:83644435-83664622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081591
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081591 1.648±0.09 14.355±0.48 20.928±1.46 0.886±0.00 1.349±0.00 1.702±0.31 2.419±1.17 14.730±8.06 2.667±0.00 15.463±1.08 11.749±10.51 29.045±5.48 6.914±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Q4 CIL_0000Q4_0002 CGP 2:82943634-83664622
CIL_0002DB CIL_0002DB_0002 CGP 2:83644435-83806916

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0019221 IDA cytokine-mediated signaling pathway
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337859 ZC3H15-001 protein_coding Homo_sapiens 0 2235
ENST00000421536 ZC3H15-002 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000437396 ZC3H15-007 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000445547 ZC3H15-009 protein_coding Homo_sapiens 0 405
ENST00000468120 ZC3H15-004 processed_transcript Homo_sapiens 0 625
ENST00000477672 ZC3H15-006 processed_transcript Homo_sapiens 2e-34 148
ENST00000481101 ZC3H15-003 processed_transcript Homo_sapiens 0 520
ENST00000496289 ZC3H15-005 processed_transcript Homo_sapiens 0 630
ENST00000498757 ZC3H15-008 retained_intron Homo_sapiens 0 678

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