C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deleted in malignant brain tumors 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084509 Dmbt1-201 ENSMUSG00000047517 10090 + 7:131032076-131121626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084509 0.029±0.02 0.046±0.02 0.128±0.02 0.003±0.00 39.186±10.08 512.302±41.11 0.010±0.00 0.005±0.00 0.113±0.07 1.641±1.14 0.006±0.00 0.108±0.05 0.010±0.00 0.171±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0000QM CIL_0000QM_0002 CGP 7:130936111-131121626
CIL_0001BH CIL_0001BH_0002 CGP 7:131032076-131146314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001824 IMP blastocyst development
GO:0001833 IDA inner cell mass cell proliferation
GO:0005044 IEA scavenger receptor activity
GO:0005515 IEA protein binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0006898 IEA receptor-mediated endocytosis
GO:0030670 IEA phagocytic vesicle membrane
GO:0030858 IDA positive regulation of epithelial cell differentiation
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330163 DMBT1-003 protein_coding Homo_sapiens 0 302
ENST00000338354 DMBT1-001 protein_coding Homo_sapiens 0 302
ENST00000344338 DMBT1-002 protein_coding Homo_sapiens 0 302
ENST00000359586 DMBT1-201 protein_coding Homo_sapiens 0 302
ENST00000368909 DMBT1-202 protein_coding Homo_sapiens 0 302
ENST00000368955 DMBT1-203 protein_coding Homo_sapiens 0 302
ENST00000368956 DMBT1-204 protein_coding Homo_sapiens 0 302
ENST00000619379 DMBT1-205 protein_coding Homo_sapiens 0 302

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