C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084599 Rhbdd2-003 ENSMUSG00000039917 10090 + 5:135636532-135644527 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084599
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084599 1.897±0.28 2.862±0.15 1.630±0.75 2.658±0.27 1.767±0.36 0.708±0.09 1.826±0.21 0.876±0.16 1.988±0.33 0.240±0.07 2.682±0.96 1.950±0.52 1.257±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NQ CIL_0006NQ_0002 CGP 5:135569937-135646448
CIL_0006NP CIL_0006NP_0002 CGP 5:135632618-135735326

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000006777 RHBDD2-001 protein_coding Homo_sapiens 0 479
ENST00000318622 RHBDD2-201 protein_coding Homo_sapiens 0 479
ENST00000428119 RHBDD2-002 protein_coding Homo_sapiens 0 479
ENST00000454791 RHBDD2-006 nonsense_mediated_decay Homo_sapiens 0 479
ENST00000467406 RHBDD2-009 processed_transcript Homo_sapiens 0 433
ENST00000468304 RHBDD2-005 processed_transcript Homo_sapiens 0 315
ENST00000613112 RHBDD2-202 protein_coding Homo_sapiens 0 475
ENST00000614848 RHBDD2-203 protein_coding Homo_sapiens 0 470

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