C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: digestive organ expansion factor homolog (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085555 Diexf-201 ENSMUSG00000016181 10090 - 1:193104403-193130251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085555 1.788±0.72 1.973±0.34 1.946±0.20 2.484±1.91 1.779±0.69 1.386±0.27 0.932±0.22 1.424±0.42 1.465±0.43 1.738±0.24 1.021±0.33 2.618±0.93 1.580±0.96 0.727±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NN CIL_0008NN_0002 VISTA 1:192506324-193107093
CIL_0008VU CIL_0008VU_0002 VISTA 1:192521976-193125952
CIL_0007SY CIL_0007SY_0002 VISTA 1:192551640-193152457
CIL_0007ZL CIL_0007ZL_0002 VISTA 1:192841048-193441723
CIL_00043H CIL_00043H_0002 CGP 1:192897307-193130251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290510 LEPREL2-002 protein_coding Homo_sapiens 0.0002 53
ENST00000457820 DIEXF-002 protein_coding Homo_sapiens 0 787
ENST00000491415 DIEXF-001 protein_coding Homo_sapiens 0 2289
ENST00000536140 LEPREL2-001 retained_intron Homo_sapiens 0.0002 53
ENST00000612048 LEPREL2-003 retained_intron Homo_sapiens 0.0001 53

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