C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6177
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085589 Gm6177-001 ENSMUSG00000057499 10090 + 1:160893120-160893584 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungOvaryPlacentaTestisENSMUST00000085589
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000085589 0.139±0.00 0.129±0.00 0.057±0.03 0.300±0.00 0.112±0.01 0.057±0.05 0.128±0.00 0.609±0.00 0.254±0.16 0.498±0.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259951 HLA-F-003 protein_coding Homo_sapiens 0 259
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 470
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 481
ENST00000383516 HLA-F-003 protein_coding Homo_sapiens 0 259
ENST00000383627 HLA-F-003 protein_coding Homo_sapiens 0 259
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 483
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 483
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 398
ENST00000406913 RP11-129H15.3-001 processed_pseudogene Homo_sapiens 0 305
ENST00000417214 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 433
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 516
ENST00000425139 HLA-F-005 protein_coding Homo_sapiens 0 259
ENST00000426470 HLA-F-005 protein_coding Homo_sapiens 0 259
ENST00000428296 HLA-F-003 protein_coding Homo_sapiens 0 259
ENST00000428990 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 433
ENST00000430472 HLA-F-003 protein_coding Homo_sapiens 0 248
ENST00000430582 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 433
ENST00000433438 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 433
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 300
ENST00000440453 RP11-170J3.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000444621 HLA-F-005 protein_coding Homo_sapiens 0 259
ENST00000445657 HLA-F-003 protein_coding Homo_sapiens 0 259
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 455
ENST00000446846 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 433
ENST00000448064 HLA-F-005 protein_coding Homo_sapiens 0 248
ENST00000452916 HLA-F-005 protein_coding Homo_sapiens 0 259
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 0 490
ENST00000458026 HLA-F-005 protein_coding Homo_sapiens 0 259
ENST00000458419 RPL23AP1-001 transcribed_processed_pseudogene Homo_sapiens 0 427
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 429
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 0 248
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 516
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 508
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 483
ENST00000475608 RP11-16F15.1-001 processed_pseudogene Homo_sapiens 0 484
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 468
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 396
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 484
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 324
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 464
ENST00000588044 RPL23AP77-001 processed_pseudogene Homo_sapiens 0 464
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 298

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