C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family F (GCN20), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087205 Abcf1-005 ENSMUSG00000038762 10090 - 17:35958670-35959614 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326195 ABCF1-001 protein_coding Homo_sapiens 0 379
ENST00000376545 ABCF1-002 protein_coding Homo_sapiens 0 379
ENST00000383587 ABCF1-002 protein_coding Homo_sapiens 0 379
ENST00000383588 ABCF1-001 protein_coding Homo_sapiens 0 379
ENST00000412443 ABCF1-002 protein_coding Homo_sapiens 0 379
ENST00000419893 ABCF1-001 protein_coding Homo_sapiens 0 379
ENST00000420257 ABCF1-002 protein_coding Homo_sapiens 0 379
ENST00000421042 ABCF1-002 protein_coding Homo_sapiens 0 379
ENST00000423247 ABCF1-001 protein_coding Homo_sapiens 0 379
ENST00000426219 ABCF1-001 protein_coding Homo_sapiens 0 379
ENST00000448939 ABCF1-002 protein_coding Homo_sapiens 0 379
ENST00000452530 ABCF1-002 protein_coding Homo_sapiens 0 379
ENST00000457078 ABCF1-001 protein_coding Homo_sapiens 0 379
ENST00000457111 ABCF1-001 protein_coding Homo_sapiens 0 379
ENST00000470464 ABCF1-005 processed_transcript Homo_sapiens 0 379
ENST00000475528 ABCF1-005 processed_transcript Homo_sapiens 0 379
ENST00000475993 ABCF1-005 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000485585 ABCF1-005 processed_transcript Homo_sapiens 0 379
ENST00000486105 ABCF1-005 processed_transcript Homo_sapiens 0 379
ENST00000494413 ABCF1-005 processed_transcript Homo_sapiens 0 379
ENST00000495194 ABCF1-005 processed_transcript Homo_sapiens 0 379

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