C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 237
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087475 Tmem237-003 ENSMUSG00000038079 10090 - 1:59100597-59119806 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000087475
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000087475 5.762±1.05 2.201±0.00 7.547±1.52 8.504±2.34 5.344±0.00 1.578±0.09 6.701±0.97 4.056±0.42 7.290±0.48 4.978±1.00 4.533±0.00 6.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0002 VISTA 1:58652904-59256413
CIL_0009CR CIL_0009CR_0002 VISTA 1:59040862-59642046
CIL_00020P CIL_00020P_0002 CGP 1:59050506-59120408
CIL_00020O CIL_00020O_0002 CGP 1:59100590-59163389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0016021 IEA integral component of membrane
GO:0030111 IMP regulation of Wnt signaling pathway
GO:0035869 IDA ciliary transition zone
GO:0042384 IMP cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286196 TMEM237-008 nonsense_mediated_decay Homo_sapiens 0 1109
ENST00000409444 TMEM237-002 protein_coding Homo_sapiens 0 1131
ENST00000409883 TMEM237-001 protein_coding Homo_sapiens 0 1131
ENST00000432684 TMEM237-003 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000444047 TMEM237-012 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000466641 TMEM237-006 processed_transcript Homo_sapiens 0 684
ENST00000466839 TMEM237-013 processed_transcript Homo_sapiens 0 496
ENST00000471318 TMEM237-016 processed_transcript Homo_sapiens 0 303
ENST00000495329 TMEM237-007 retained_intron Homo_sapiens 6e-36 158
ENST00000621467 TMEM237-201 protein_coding Homo_sapiens 0 1131

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