C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: testis specific 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088072 Tsga10-002 ENSMUSG00000060771 10090 - 1:37760823-37865298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverLungTestisENSMUST00000088072
Transcript ID Adrenal Breast Liver Lung Testis
ENSMUST00000088072 0.192±0.11 0.071±0.00 0.042±0.00 0.262±0.06 5.166±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034C CIL_00034C_0002 CGP 1:37611677-37865298

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 ISA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0016020 IEA membrane
GO:0030031 IMP cell projection assembly
GO:0031514 IDA motile cilium
GO:0043005 IDA neuron projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355053 TSGA10-002 protein_coding Homo_sapiens 0 1936
ENST00000393482 TSGA10-003 protein_coding Homo_sapiens 0 2082
ENST00000393483 TSGA10-001 protein_coding Homo_sapiens 0 1936
ENST00000409564 TSGA10-005 protein_coding Homo_sapiens 0 2981
ENST00000410001 TSGA10-007 protein_coding Homo_sapiens 0 2366
ENST00000462782 TSGA10-012 retained_intron Homo_sapiens 0 259
ENST00000471174 TSGA10-010 processed_transcript Homo_sapiens 0 433
ENST00000476849 TSGA10-009 processed_transcript Homo_sapiens 0 460
ENST00000478090 TSGA10-006 processed_transcript Homo_sapiens 0 1592
ENST00000488960 TSGA10-015 processed_transcript Homo_sapiens 0 1014
ENST00000489546 TSGA10-008 processed_transcript Homo_sapiens 0 590
ENST00000489926 TSGA10-014 processed_transcript Homo_sapiens 0 542
ENST00000494483 TSGA10-011 processed_transcript Homo_sapiens 0 289
ENST00000497915 TSGA10-013 processed_transcript Homo_sapiens 0 617

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