C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10221
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088299 Gm10221-201 ENSMUSG00000067719 10090 - 5:24581458-24581879 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088299 5.186±1.94 9.144±3.63 1.639±1.17 10.216±8.01 1.091±0.61 1.833±0.89 8.674±1.60 6.137±1.85 10.735±8.81 1.258±0.48 13.165±5.17 1.204±0.48 0.350±0.21 1.287±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0007RX CIL_0007RX_0002 VISTA 5:24430554-25031843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000276 IEA mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
GO:0005753 ISS mitochondrial proton-transporting ATP synthase complex
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015986 IEA ATP synthesis coupled proton transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300688 ATP5L-001 protein_coding Homo_sapiens 0 468
ENST00000434169 ATP5LP4-001 processed_pseudogene Homo_sapiens 0 235
ENST00000440646 ATP5LP2-001 processed_pseudogene Homo_sapiens 0 355
ENST00000514223 ATP5LP3-001 processed_pseudogene Homo_sapiens 0 250
ENST00000524422 ATP5L-006 protein_coding Homo_sapiens 0 239
ENST00000527186 ATP5L-007 retained_intron Homo_sapiens 0 446
ENST00000529460 ATP5L-002 processed_transcript Homo_sapiens 0 444
ENST00000529770 ATP5L-003 processed_transcript Homo_sapiens 0 446
ENST00000529790 ATP5L-008 retained_intron Homo_sapiens 0 446
ENST00000533172 ATP5L-004 processed_transcript Homo_sapiens 0 231
ENST00000534385 ATP5L-005 retained_intron Homo_sapiens 0 241
ENST00000560431 RP11-30K9.7-001 processed_pseudogene Homo_sapiens 0 226
ENST00000605824 RP11-797J4.1-001 processed_pseudogene Homo_sapiens 0 209

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