| Transcript ID | Bladder | Brain | Kidney | Placenta |
|---|---|---|---|---|
| ENSMUST00000089215 | 1.514±0.05 | 1.322±0.29 | 0.015±0.00 | 0.022±0.02 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | contactin 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000089215  |
Cntn6-001 |
ENSMUSG00000030092 |
10090 | + |
6:104492922-104863406  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00050I | CIL_00050I_0002 | CGP | 6:103510876-104863406 |
| CIL_00050H | CIL_00050H_0002 | CGP | 6:104492790-106699310 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005886 | TAS | plasma membrane |
| GO:0007155 | IEA | cell adhesion |
| GO:0007219 | IEA | Notch signaling pathway |
| GO:0031225 | IEA | anchored component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000350110
|
CNTN6-004 | protein_coding | Homo_sapiens | 0 | 4128 |
|
ENST00000394261
|
CNTN6-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 809 |
|
ENST00000397479
|
CNTN6-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 3356 |
|
ENST00000413210
|
CNTN6-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 510 |
|
ENST00000446702
|
CNTN6-001 | protein_coding | Homo_sapiens | 0 | 4133 |
|
ENST00000485257
|
CNTN6-006 | retained_intron | Homo_sapiens | 0 | 414 |
