C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin XI
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090945 Syt11-201 ENSMUSG00000068923 10090 - 3:88744701-88772599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000090945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000090945 3.793±2.64 4.578±0.93 3.484±0.01 60.943±15.31 1.912±0.68 3.658±0.30 1.927±0.42 1.614±0.56 0.284±0.24 3.136±0.38 0.838±0.24 6.341±2.39 0.720±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005544 ISS calcium-dependent phospholipid binding
GO:0005887 IDA integral component of plasma membrane
GO:0006810 IEA transport
GO:0008021 IEA synaptic vesicle
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368324 SYT11-001 protein_coding Homo_sapiens 0 1899

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