C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class VI, type 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091237 Atp11a-002 ENSMUSG00000031441 10090 + 8:12757016-12868728 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000091237
Transcript ID Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000091237 3.987±0.30 2.170±0.00 5.760±0.55 0.389±0.10 4.783±0.50 14.457±7.43 4.328±0.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SC CIL_0008SC_0002 VISTA 8:12162372-12763356
CIL_00014E CIL_00014E_0002 CGP 8:12757014-13020905

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005765 IEA lysosomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0055037 IEA recycling endosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375630 ATP11A-201 protein_coding Homo_sapiens 0 3341
ENST00000375645 ATP11A-202 protein_coding Homo_sapiens 0 3336
ENST00000418678 ATP11A-003 protein_coding Homo_sapiens 0 2785
ENST00000459908 ATP11A-002 retained_intron Homo_sapiens 0 2385
ENST00000471555 ATP11A-011 nonsense_mediated_decay Homo_sapiens 0 987
ENST00000487903 ATP11A-001 protein_coding Homo_sapiens 0 3336
ENST00000489577 ATP11A-012 processed_transcript Homo_sapiens 0 268

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