C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of sex-limitation candidate 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091526 Rslcan18-001 ENSMUSG00000074824 10090 - 13:67096613-67114028 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000091526
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000091526 0.126±0.00 0.214±0.00 0.461±0.00 0.197±0.02 0.187±0.00 0.212±0.04 0.360±0.23 0.329±0.09 0.217±0.00 0.132±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006CF CIL_0006CF_0005 CGP 13:67096613-67141787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000125726 CR788316.4-201 protein_coding Danio_rerio 0.00002 57
ENST00000296091 ZNF502-001 protein_coding Homo_sapiens 3e-17 95
ENST00000300870 ZNF267-001 protein_coding Homo_sapiens 5e-26 124
ENST00000328199 ZNF662-003 protein_coding Homo_sapiens 0.00000003 66
ENST00000357254 ZNF23-003 protein_coding Homo_sapiens 0.0002 53
ENST00000358700 ZNF23-004 protein_coding Homo_sapiens 0.0002 53
ENST00000393539 ZNF23-001 protein_coding Homo_sapiens 0.0002 53
ENST00000396077 ZNF445-001 protein_coding Homo_sapiens 0.000000006 69
ENST00000421176 ZNF284-001 protein_coding Homo_sapiens 0.00000004 66
ENST00000422021 ZNF662-006 protein_coding Homo_sapiens 0.000000003 66
ENST00000425708 ZNF445-201 protein_coding Homo_sapiens 0.000000007 69
ENST00000436624 ZNF502-002 protein_coding Homo_sapiens 2e-17 95
ENST00000440367 ZNF662-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000449836 ZNF502-201 protein_coding Homo_sapiens 3e-17 95
ENST00000460529 ZNF445-002 retained_intron Homo_sapiens 0.0000000008 69
ENST00000475386 ZNF662-002 retained_intron Homo_sapiens 0.00000002 66
ENST00000497160 ZNF23-002 protein_coding Homo_sapiens 0.0002 53
ENST00000561908 ZNF23-001 nonsense_mediated_decay Homo_sapiens 0.0002 53
ENST00000565718 ZNF23-010 protein_coding Homo_sapiens 0.00003 53
ENST00000567340 ZNF23-008 protein_coding Homo_sapiens 0.00004 53
ENST00000575471 ZNF267-006 retained_intron Homo_sapiens 7e-26 124
ENST00000591793 ZNF223-001 nonsense_mediated_decay Homo_sapiens 0.00000003 66
ENST00000597761 ZNF730-001 protein_coding Homo_sapiens 1.99965e-42 178
ENST00000617032 ZNF445-202 protein_coding Homo_sapiens 0.0000000008 69

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