C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: family with sequence similarity 219, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093833 Fam219b-201 ENSMUSG00000032305 10090 + 9:57537528-57543187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaENSMUST00000093833
Transcript ID Brain Liver Ovary Placenta
ENSMUST00000093833 4.593±0.15 3.303±0.06 3.133±0.27 5.624±2.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834
CIL_0002A1 CIL_0002A1_0002 CGP 9:57521232-57543187

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357635 FAM219B-001 protein_coding Homo_sapiens 0 363
ENST00000562698 FAM219B-018 protein_coding Homo_sapiens 0 363
ENST00000563069 FAM219B-003 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000563119 FAM219B-006 protein_coding Homo_sapiens 0 363
ENST00000563413 FAM219B-017 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000563671 FAM219B-014 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000563706 FAM219B-007 processed_transcript Homo_sapiens 6e-33 145
ENST00000563877 FAM219B-019 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000564019 FAM219B-015 nonsense_mediated_decay Homo_sapiens 0 359
ENST00000564857 FAM219B-008 retained_intron Homo_sapiens 0 326
ENST00000565772 FAM219B-004 protein_coding Homo_sapiens 0 252
ENST00000566132 FAM219B-012 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000566194 FAM219B-009 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000566894 FAM219B-005 retained_intron Homo_sapiens 0 226
ENST00000567388 FAM219B-013 nonsense_mediated_decay Homo_sapiens 0 219
ENST00000569524 FAM219B-002 nonsense_mediated_decay Homo_sapiens 0 226
ENST00000569761 FAM219B-010 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000570143 FAM219B-016 nonsense_mediated_decay Homo_sapiens 0 222

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