C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093940 Arhgap23-002 ENSMUSG00000049807 10090 + 11:97491144-97502398 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000093940
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000093940 8.656±3.82 14.262±7.90 5.570±1.06 2.205±0.00 5.426±0.86 2.470±0.81 2.270±0.46 1.683±0.26 6.466±4.08 12.630±0.44 0.993±0.12 7.755±3.24 4.168±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SJ CIL_0000SJ_0002 CGP 11:97362551-97502402

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000562773 ARHGAP23P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 3e-20 104
ENST00000568208 RP11-1166P10.1-001 transcribed_unprocessed_pseudogene Homo_sapiens 4e-19 100
ENST00000610551 ARHGAP23-201 protein_coding Homo_sapiens 0 1051
ENST00000614693 ARHGAP23-004 protein_coding Homo_sapiens 4e-35 152
ENST00000618325 ARHGAP23-011 retained_intron Homo_sapiens 0 276
ENST00000620329 ARHGAP23-005 protein_coding Homo_sapiens 0 215
ENST00000620417 ARHGAP23-001 protein_coding Homo_sapiens 0 276
ENST00000621154 RP11-989E6.13-001 unprocessed_pseudogene Homo_sapiens 3e-20 104
ENST00000622683 ARHGAP23-006 protein_coding Homo_sapiens 0 1051

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