C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, type 2C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095171 Atp2c2-201 ENSMUSG00000034112 10090 + 8:119700009-119757718 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095171
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095171 0.236±0.24 0.015±0.00 0.960±0.14 0.522±0.67 1.064±0.36 33.713±5.67 0.219±0.15 0.173±0.08 0.052±0.04 2.839±1.00 0.029±0.01 1.892±0.56 2.897±2.13 0.792±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IQ CIL_0007IQ_0002 CGP 8:119666523-119757718
CIL_000006 CIL_000006_0002 CGP 8:119700009-119778416

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262429 ATP2C2-001 protein_coding Homo_sapiens 0 2457
ENST00000416219 ATP2C2-002 protein_coding Homo_sapiens 0 2135
ENST00000420010 ATP2C2-004 processed_transcript Homo_sapiens 0 2074
ENST00000565631 ATP2C2-003 retained_intron Homo_sapiens 0 2351
ENST00000567222 ATP2C2-005 retained_intron Homo_sapiens 0 326
ENST00000567892 ATP2C2-013 retained_intron Homo_sapiens 0 364

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