C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial carrier homolog 1 (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095427 Mtch1-001 ENSMUSG00000024012 10090 - 17:29332072-29347904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095427 40.725±6.98 35.076±7.22 31.509±5.98 63.674±36.91 30.087±2.93 43.830±7.80 25.351±1.65 30.724±3.50 11.493±1.09 35.765±0.13 10.409±3.94 51.311±10.38 19.267±12.55 4.253±1.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0002Y8 CIL_0002Y8_0002 CGP 17:29318877-29347904
CIL_0002Y4 CIL_0002Y4_0002 CGP 17:29332072-29379660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA:ISS mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006810 IEA transport
GO:0006919 ISS activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0016021 IEA integral component of membrane
GO:0043065 ISS positive regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373616 MTCH1-001 protein_coding Homo_sapiens 0 1157
ENST00000373627 MTCH1-008 protein_coding Homo_sapiens 0 1633
ENST00000405630 RP11-390P2.2-001 processed_pseudogene Homo_sapiens 0 294
ENST00000418541 MTCH1-003 protein_coding Homo_sapiens 0 361
ENST00000460219 MTCH1-005 protein_coding Homo_sapiens 0 1031
ENST00000471737 MTCH1-004 processed_transcript Homo_sapiens 0 388
ENST00000492754 MTCH1-006 processed_transcript Homo_sapiens 1e-37 159
ENST00000538808 MTCH1-201 protein_coding Homo_sapiens 0 926
ENST00000540985 RP11-504G3.4-001 transcribed_processed_pseudogene Homo_sapiens 0 634

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