C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10335
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096020 Gm10335-001 ENSMUSG00000071532 10090 + 10:14523078-14523545 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000096020
Transcript ID Adipose Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000096020 0.280±0.00 21.654±19.51 5.329±3.71 0.222±0.00 0.155±0.05 0.367±0.00 8.802±11.28 0.127±0.00 0.399±0.13 0.654±0.42 0.691±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332361 RP11-106A1.2-001 processed_pseudogene Homo_sapiens 0 542
ENST00000355731 RPL23A-003 protein_coding Homo_sapiens 0 547
ENST00000394935 RPL23A-004 protein_coding Homo_sapiens 0 549
ENST00000394938 RPL23A-009 protein_coding Homo_sapiens 0 549
ENST00000395315 RPL23AP32-001 processed_pseudogene Homo_sapiens 0 448
ENST00000406913 RP11-129H15.3-001 processed_pseudogene Homo_sapiens 0 309
ENST00000416139 RP11-384C4.3-001 processed_pseudogene Homo_sapiens 0 549
ENST00000422514 RPL23A-001 protein_coding Homo_sapiens 0 593
ENST00000437246 AC005884.1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000437556 RPL23AP22-001 processed_pseudogene Homo_sapiens 0 292
ENST00000440453 RP11-170J3.2-001 processed_pseudogene Homo_sapiens 0 492
ENST00000446445 AC139452.2-001 processed_pseudogene Homo_sapiens 0 521
ENST00000453844 RPL23AP3-001 processed_pseudogene Homo_sapiens 0 523
ENST00000456160 AC009974.11-001 processed_pseudogene Homo_sapiens 0 481
ENST00000467573 RPL23AP12-001 processed_pseudogene Homo_sapiens 0 473
ENST00000469465 RPL23AP64-001 processed_pseudogene Homo_sapiens 0 272
ENST00000471152 RP11-3P17.3-001 processed_pseudogene Homo_sapiens 0 593
ENST00000471227 RPL23AP2-001 processed_pseudogene Homo_sapiens 0 555
ENST00000472628 RPL23A-006 protein_coding Homo_sapiens 0 551
ENST00000475608 RP11-16F15.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000479658 AC114752.2-001 processed_pseudogene Homo_sapiens 0 518
ENST00000484754 RP11-4H14.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000491601 RP11-58O9.1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000492507 RPL23AP73-001 processed_pseudogene Homo_sapiens 0 372
ENST00000492925 RP11-413E6.1-001 processed_pseudogene Homo_sapiens 0 435
ENST00000496182 RPL23A-002 protein_coding Homo_sapiens 0 549
ENST00000498163 RP11-1149O23.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000498752 RP11-472I20.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000569211 CTC-661I16.1-001 processed_pseudogene Homo_sapiens 0 357
ENST00000576277 CTC-281F24.2-001 processed_pseudogene Homo_sapiens 0 193
ENST00000578181 RPL23A-011 protein_coding Homo_sapiens 0 532
ENST00000582736 RPL23A-008 retained_intron Homo_sapiens 0 294
ENST00000588044 RPL23AP77-001 processed_pseudogene Homo_sapiens 0 508
ENST00000592379 AD000091.3-001 processed_pseudogene Homo_sapiens 0 316
ENST00000623642 AL589822.1-201 pseudogene Homo_sapiens 0 488

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