C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 17415
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096427 Gm17415-001 ENSMUSG00000090489 10090 + 1:93421700-93422488 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096427 0.920±0.34 0.846±0.32 0.254±0.13 0.237±0.04 0.473±0.26 0.706±0.35 0.210±0.10 0.306±0.07 0.489±0.36 0.396±0.02 0.148±0.09 0.781±0.43 0.380±0.14 0.749±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000473 CIL_000473_0002 CGP 1:93373930-93478815
CIL_0002JH CIL_0002JH_0002 CGP 1:93405940-93510260

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315731 RPL7A-005 protein_coding Homo_sapiens 0 191
ENST00000323345 RPL7A-009 protein_coding Homo_sapiens 0 909
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 636
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 592
ENST00000401715 RP3-486D24.1-001 processed_pseudogene Homo_sapiens 0 732
ENST00000417617 AC004129.9-001 processed_pseudogene Homo_sapiens 0 612
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 462
ENST00000424041 RPL7AP14-001 processed_pseudogene Homo_sapiens 0 739
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0 484
ENST00000426651 RPL7A-004 protein_coding Homo_sapiens 0 553
ENST00000428027 RP11-534L20.4-001 processed_pseudogene Homo_sapiens 0 787
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0 547
ENST00000434317 RP11-577H5.1-001 processed_pseudogene Homo_sapiens 0 689
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 640
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0 405
ENST00000452821 RP11-170M17.2-001 processed_pseudogene Homo_sapiens 0 771
ENST00000453064 RP11-467H10.1-001 processed_pseudogene Homo_sapiens 0 684
ENST00000463740 RPL7A-001 processed_transcript Homo_sapiens 0 555
ENST00000468019 RPL7A-003 processed_transcript Homo_sapiens 0 909
ENST00000469026 RPL7AP60-001 processed_pseudogene Homo_sapiens 0 785
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 752
ENST00000473054 RP11-204K16.1-001 processed_pseudogene Homo_sapiens 0 708
ENST00000473913 RP11-463O9.1-001 processed_pseudogene Homo_sapiens 0 752
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 364
ENST00000477943 RPL7AP6-001 processed_pseudogene Homo_sapiens 0 887
ENST00000481963 RPL7AP8-001 processed_pseudogene Homo_sapiens 0 737
ENST00000482859 RPL7AP30-001 processed_pseudogene Homo_sapiens 0 837
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 595
ENST00000485706 RPL7A-006 processed_transcript Homo_sapiens 0 470
ENST00000486157 RP11-342F17.2-001 processed_pseudogene Homo_sapiens 0 665
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 808
ENST00000488538 RPL7AP26-001 processed_pseudogene Homo_sapiens 0 704
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000496554 RPL7A-002 processed_transcript Homo_sapiens 0 652
ENST00000496790 FAM185A-005 processed_transcript Homo_sapiens 0 224
ENST00000497325 CTD-2270N23.1-001 processed_pseudogene Homo_sapiens 0 804
ENST00000525465 RP11-58K22.2-001 processed_pseudogene Homo_sapiens 0 628
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 455
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 876

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