C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096987 Sept5-201 ENSMUSG00000072214 10090 - 16:18621811-18629938 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096987
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096987 8.183±0.85 3.839±0.26 20.710±0.19 197.607±112.60 6.576±1.31 44.082±3.74 2.129±0.40 1.390±0.17 1.087±1.35 5.611±1.76 1.266±0.16 19.969±2.88 73.400±38.58 19.263±2.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684
CIL_0000RI CIL_0000RI_0002 CGP 16:18620319-18629938
CIL_0000RL CIL_0000RL_0002 CGP 16:18621811-18778260

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005886 ISS plasma membrane
GO:0005938 IDA cell cortex
GO:0007049 IEA cell cycle
GO:0008021 ISS synaptic vesicle
GO:0017157 ISS regulation of exocytosis
GO:0031105 IEA septin complex
GO:0043195 IDA terminal bouton
GO:0043679 IDA axon terminus
GO:0045202 IDA synapse
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366425 GP1BB-001 protein_coding Homo_sapiens 7e-31 139
ENST00000383045 SEPT5-004 protein_coding Homo_sapiens 0 1332
ENST00000395109 SEPT5-009 protein_coding Homo_sapiens 0 758
ENST00000406172 SEPT5-015 nonsense_mediated_decay Homo_sapiens 0 970
ENST00000406395 SEPT5-014 protein_coding Homo_sapiens 0 1469
ENST00000412544 SEPT5-008 protein_coding Homo_sapiens 0 1266
ENST00000413258 SEPT5-016 protein_coding Homo_sapiens 0 222
ENST00000431044 SEPT5-006 nonsense_mediated_decay Homo_sapiens 0 1330
ENST00000431124 SEPT5-010 protein_coding Homo_sapiens 0 922
ENST00000438754 SEPT5-002 protein_coding Homo_sapiens 0 1277
ENST00000455784 SEPT5-001 protein_coding Homo_sapiens 0 1530
ENST00000455843 SEPT5-003 nonsense_mediated_decay Homo_sapiens 0 1332
ENST00000470814 SEPT5-005 retained_intron Homo_sapiens 0 584
ENST00000477238 SEPT5-012 retained_intron Homo_sapiens 0 246
ENST00000480423 SEPT5-013 retained_intron Homo_sapiens 0 542
ENST00000622227 SEPT5-201 protein_coding Homo_sapiens 0 1522

Loading