C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096990 Cdc45-003 ENSMUSG00000000028 10090 - 16:18780453-18811626 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000096990
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000096990 3.955±0.00 4.448±0.47 6.424±1.02 3.982±0.70 4.061±0.95 12.978±5.00 2.788±0.00 8.531±1.86 8.920±3.03 12.292±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095F CIL_00095F_0002 VISTA 16:18254168-18857637
CIL_00099J CIL_00099J_0002 VISTA 16:18285741-18886132
CIL_0008BW CIL_0008BW_0002 VISTA 16:18293232-18893684
CIL_0000RN CIL_0000RN_0002 CGP 16:18776847-18811987
CIL_0006PK CIL_0006PK_0002 CGP 16:18780447-18835261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006270 IEA DNA replication initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263201 CDC45-201 protein_coding Homo_sapiens 0 1652
ENST00000404724 CDC45-002 protein_coding Homo_sapiens 0 1934
ENST00000407835 CDC45-001 protein_coding Homo_sapiens 0 1652
ENST00000428937 CDC45-008 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000437685 CDC45-202 protein_coding Homo_sapiens 0 1432
ENST00000438587 CDC45-003 protein_coding Homo_sapiens 0 213
ENST00000455750 CDC45-004 protein_coding Homo_sapiens 0 292
ENST00000471470 CDC45-009 retained_intron Homo_sapiens 0 665
ENST00000483431 CDC45-007 processed_transcript Homo_sapiens 0 292
ENST00000487669 CDC45-006 retained_intron Homo_sapiens 0 230
ENST00000491520 CDC45-005 retained_intron Homo_sapiens 0 215
ENST00000493724 CDC45-010 retained_intron Homo_sapiens 0 329

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