C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutathione peroxidase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097227 Gpx4-002 ENSMUSG00000075706 10090 + 10:80054037-80056439 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000097227
Transcript ID Ovary Testis
ENSMUST00000097227 30.104±0.00 344.108±197.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0000QU CIL_0000QU_0002 CGP 10:80035949-80056439
CIL_0000QT CIL_0000QT_0002 CGP 10:80047166-80102698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006749 IEA glutathione metabolic process
GO:0007568 IEA aging
GO:0008430 IEA selenium binding
GO:0032355 IEA response to estradiol
GO:0042744 IEA hydrogen peroxide catabolic process
GO:0043295 IEA glutathione binding
GO:0047066 IEA phospholipid-hydroperoxide glutathione peroxidase activity
GO:0050727 IEA regulation of inflammatory response
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354171 GPX4-002 protein_coding Homo_sapiens 0 702
ENST00000585362 GPX4-004 protein_coding Homo_sapiens 0 383
ENST00000587648 GPX4-009 protein_coding Homo_sapiens 0 588
ENST00000587932 GPX4-005 retained_intron Homo_sapiens 0 206
ENST00000588919 GPX4-003 protein_coding Homo_sapiens 0 612
ENST00000589115 GPX4-007 protein_coding Homo_sapiens 0 558
ENST00000592940 GPX4-001 retained_intron Homo_sapiens 0 399
ENST00000593032 GPX4-006 protein_coding Homo_sapiens 0 440
ENST00000611653 GPX4-011 protein_coding Homo_sapiens 0 702
ENST00000614791 GPX4-010 protein_coding Homo_sapiens 0 224
ENST00000616066 GPX4-201 protein_coding Homo_sapiens 0 689
ENST00000622390 GPX4-202 protein_coding Homo_sapiens 0 688

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